Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs35501037 chr6:27739566 T/A 1.32E-8 288 25.67 26.37 9.77 KM Plot
KIRP rs35535623 chr5:176629296 A/G 2.34E-8 287 25.78 25.7 4.93 KM Plot
KIRP rs35567724 chr1:26608769 C/T 2.45E-6 286 25.62 29.77 14.38 KM Plot
KIRP rs35589606 chr5:6574023 C/CA 9.96E-10 283 25.97 28.03 14.32 KM Plot
KIRP rs35598171 chr9:96564040 T/G 1.62E-5 287 24.73 30.95 13.17 KM Plot
KIRP rs35599612 chr19:8474708 G/C 3.58E-5 277 25.37 32.93 11.43 KM Plot
KIRP rs35603744 chr3:124471507 G/T 0.000181 286 25.93 27.13 16.4 KM Plot
KIRP rs35619372 chr15:60799019 CT/C 3.78E-5 286 25.5 28.03 14.88 KM Plot
KIRP rs35643812 chr2:128468502 C/A 1.26E-6 287 25.97 22.57 8.47 KM Plot
KIRP rs35656932 chr6:28191288 G/T 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs35662124 chr18:38843560 T/C 2.14E-5 287 25.5 35.88 18.38 KM Plot
KIRP rs35706352 chr6:27793992 G/A 1.21E-8 289 25.63 26.37 9.77 KM Plot
KIRP rs35715914 chr6:27592003 C/T 1.56E-8 285 25.58 29.43 9.77 KM Plot
KIRP rs35744819 chr6:28318331 G/T 1.76E-8 286 25.6 27.78 9.77 KM Plot
KIRP rs35749575 chr6:28114818 G/T 1.42E-8 288 25.58 29.2 9.77 KM Plot